Workflows


 training-workflow (6) 1000genomes (1) astronomy (1) bioinformatics (1) cnn-keras (1) diamond-workflow (1) example-workflow (2) genomics (1) machine-learning (2) nlp (1) pegasus-wms (1) pipeline (1) ray-tune (1) scientific-workflows (1) workflow (1)
31 Dec 2023

1000genome-workflow

Bioinformatics workflow that identifies mutational overlaps using data from the 1000 genomes project

1000genomes  pegasus-wms  scientific-workflows 
28 Aug 2023

process-workflow

Process workflow example

 training workflow  
28 Aug 2023

montage-workflow-v3

A new Python DAX generator version of the classic Montage workflow. This workflow uses the Montage toolkit to re-project, background correct and add astronomical images into custom mosaics.

astronomy 
01 May 2023

rosetta-pegasus

This is a Pegasus workflow for running Rosetta's De novo structure prediction on the OSG. The workflow predicts the 3-dimensional structure of a protein starting with an amino acid sequence, using the Abinitio Relax algorithm.

12 Jan 2023

hierarichal-sample-wf

No description provided

 training workflow  
06 Jan 2023

split-workflow

Split workflow example

 training workflow  
06 Jan 2023

pipeline-workflow

Pipeline workflow example

 training workflow   example-workflow  pipeline 
06 Jan 2023

merge-workflow

Merge workflow example

 training workflow  
08 Nov 2022

variant-calling-pegasus-workflow

A Pegasus Workflow for "Automating a Variant Calling Workflow" from Data Carpentry Lesson "Data Wrangling and Processing for Genomics"

bioinformatics  genomics  workflow 
03 Aug 2022

lung-instance-segmentation-workflow

Instance segmentation with U-Net/Mask R-CNN workflow using Keras & Ray Tune

cnn-keras  machine-learning  ray-tune 
26 Apr 2022

diamond-workflow

Pegasus Diamond Workflow

 training workflow   diamond-workflow  example-workflow 
21 Jan 2022

orcasound-workflow

Pegasus workflow for the orca github actions workflow

12 Nov 2020

pegasus-fb-nlp

Example of a Facebook NLP pipeline

machine-learning  nlp